June 2026

Model Performance Series

Illustration of a Happy Protein with Its PTMs

Astra AI on Enzymes

Enzymes are the most heavily exploited drug-target class in medicine — from kinase to protease inhibitors — and a distinctive computational target: defined by the chemistry they perform rather than a shared fold, with catalysis at a handful of active-site residues. This report shows how Orbion's Astra AI Suite characterizes them from sequence alone — function, topology, PTM sites, binding pockets, and thermostability — measured against public experimental ground truth across 6,304 catalytic proteins.


  • 95.3% Recognized as Enzymatic

  • 82% Pocket Success

  • ρ=0.93 ΔTm (T4 Lysozyme)

Illustration of a Happy Protein with Its PTMs

ρ=0.93 Thermostability Correlation

The suite's flagship result. On a deep mutational scan of T4 lysozyme — the canonical stability reference — predicted vs. experimental ΔTm reach ρ 0.93 (n=315); across the full set, ρ 0.88 with 90% directional accuracy on strong-effect mutations. Rank order and direction are reliable.

Orbion's AstraPTM2 Machine Learning Model's PTM Predictions on an Example Protein

95.3% Recognized as Enzymatic

Function is the defining question for enzymes, and the EC head answers it — 95.3% recognized as enzymatic, distributed across all seven EC top-classes in proportions that track nature. GO molecular-function recovered in the top-5 for 94.2%.

Orbion's AstraPTM2 Machine Learning Model's PTM Predictions on an Example Protein

82% Pocket Success

62% ligand recall and 82% pocket-success across 2,318 enzymes with co-crystal data. Strongest on the chemically well-defined catalytic centres — dioxygenases, kinase ATP sites, FAD/NAD flavoenzymes.

Orbion's AstraPTM2 Machine Learning Model's PTM Predictions on an Example Protein

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